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  • Top cofit genes for GFF3041 from Variovorax sp. SCN45

    Outer membrane porin protein 32 precursor
    SEED: Outer membrane porin protein 32 precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5122 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.52
    2 GFF3007 hypothetical protein no 0.51
    3 GFF5440 RNA polymerase ECF-type sigma factor no 0.50
    4 GFF849 putative carboxylesterase no 0.50
    5 GFF5805 Putative transmembrane protein no 0.49
    6 GFF417 Aspartate aminotransferase (AspB-4) (EC 2.6.1.1) no 0.49
    7 GFF1681 Methylisocitrate lyase (EC 4.1.3.30) no 0.48
    8 GFF6535 Permease of the drug/metabolite transporter (DMT) superfamily no 0.47
    9 GFF1262 Rhodanese-related sulfurtransferase no 0.47
    10 GFF6374 predicted 2-keto-3-deoxyxylonate dehydratase no 0.47
    11 GFF1594 Antitoxin DinJ (binds YafQ toxin) no 0.47
    12 GFF363 Transcriptional regulator, Crp/Fnr family no 0.47
    13 GFF3330 Isohexenylglutaconyl-CoA hydratase (EC 4.2.1.57) no 0.46
    14 GFF7016 FAD-dependent oxidoreductase no 0.46
    15 GFF6690 hypothetical protein no 0.45
    16 GFF5955 Transcriptional regulator, LysR family no 0.45
    17 GFF323 Possible pyrimidine-degrading protein DUF1688 no 0.45
    18 GFF2065 Peptidase, M23/M37 family no 0.44
    19 GFF1832 TRAP transporter solute receptor, unknown substrate 3 no 0.44
    20 GFF4438 Sugar kinases, ribokinase family no 0.44

    Or look for negative cofitness