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  • Top cofit genes for GFF3039 from Sphingobium sp. HT1-2

    TonB-dependent receptor
    SEED: Outer membrane receptor proteins, mostly Fe transport

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3672 FIG00985981: hypothetical protein no 0.76
    2 GFF4431 FIG00983375: hypothetical protein no 0.72
    3 GFF2264 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) no 0.70
    4 GFF3594 Histidine kinase no 0.70
    5 GFF1196 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) no 0.66
    6 GFF768 Putative formate dehydrogenase oxidoreductase protein no 0.65
    7 GFF5409 hypothetical protein no 0.65
    8 GFF4266 hypothetical protein no 0.64
    9 GFF1793 hypothetical protein no 0.63
    10 GFF4726 Putative inner membrane protein no 0.62
    11 GFF4014 hypothetical protein no 0.62
    12 GFF222 hypothetical protein no 0.62
    13 GFF5331 hypothetical protein no 0.61
    14 GFF3172 Exopolyphosphatase (EC 3.6.1.11) no 0.60
    15 GFF173 hypothetical protein no 0.60
    16 GFF4619 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.60
    17 GFF303 Phage protein no 0.60
    18 GFF799 hypothetical protein no 0.59
    19 GFF622 hypothetical protein no 0.59
    20 GFF2833 Maltodextrin glucosidase (EC 3.2.1.20) no 0.58

    Or look for negative cofitness