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  • Top cofit genes for GFF3032 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, LuxR family
    SEED: two component transcriptional regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5815 Uncharacterized MFS-type transporter no 0.56
    2 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.56
    3 GFF2337 hypothetical protein no 0.56
    4 GFF5583 Transcriptional regulator PA0181, LysR family no 0.54
    5 GFF5515 Lysophospholipase (EC 3.1.1.5) no 0.54
    6 GFF2904 hypothetical protein no 0.53
    7 GFF6407 Phytanoyl-CoA dioxygenase no 0.52
    8 GFF2894 Transcriptional regulator, GntR family no 0.51
    9 GFF5245 FIG00771430: hypothetical protein no 0.51
    10 GFF2138 Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1) no 0.49
    11 GFF2709 hypothetical protein no 0.48
    12 GFF1670 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.48
    13 GFF4038 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.48
    14 GFF2406 DipZ protein no 0.48
    15 GFF6721 Transcriptional regulator, LysR family no 0.47
    16 GFF7101 hypothetical protein no 0.47
    17 GFF6776 Maltodextrin ABC transporter, permease protein MdxG no 0.46
    18 GFF6799 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.46
    19 GFF1898 Phosphoserine phosphatase (EC 3.1.3.3) no 0.46
    20 GFF3703 LemA family protein no 0.46

    Or look for negative cofitness