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  • Top cofit genes for GFF3027 from Variovorax sp. SCN45

    T6SS component TssK (ImpJ/VasE)
    SEED: Uncharacterized protein ImpJ/VasE
    KEGG: type VI secretion system protein ImpJ

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF833 Proteins containing SET domain no 0.60
    2 GFF7017 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.58
    3 GFF4482 Transcriptional regulator MraZ no 0.55
    4 GFF1332 no description no 0.54
    5 GFF4665 no description no 0.53
    6 GFF472 hypothetical protein no 0.53
    7 GFF5201 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) no 0.53
    8 GFF6567 hypothetical protein no 0.53
    9 GFF4018 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.52
    10 GFF4778 Broad-specificity amino acid ABC transporter, permease protein 1 no 0.52
    11 GFF6094 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) no 0.52
    12 GFF864 no description no 0.51
    13 GFF273 Transcriptional regulator, Xre family no 0.51
    14 GFF2382 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.66) no 0.51
    15 GFF1797 FIG022199: FAD-binding protein no 0.50
    16 GFF4776 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.50
    17 GFF4877 no description no 0.50
    18 GFF4227 Thiamine pyrophosphate-requiring enzymes no 0.49
    19 GFF4334 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.49
    20 GFF286 Transcriptional regulator, LysR family no 0.49

    Or look for negative cofitness