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  • Top cofit genes for GFF3027 from Hydrogenophaga sp. GW460-11-11-14-LB1

    Tricarboxylate transport transcriptional regulator TctD
    SEED: Tricarboxylate transport transcriptional regulator TctD
    KEGG: two-component system, OmpR family, response regulator TctD

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4847 Arylesterase precursor (EC 3.1.1.2) 0.32 0.58
    2 GFF1285 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) no 0.53
    3 GFF5758 Transcriptional regulators, LysR family no 0.50
    4 GFF2698 response regulator no 0.50
    5 GFF2884 Urea ABC transporter, ATPase protein UrtE no 0.48
    6 GFF5822 Nitrate/nitrite sensor protein (EC 2.7.3.-) no 0.47
    7 GFF3303 Hydroxymethylpyrimidine ABC transporter, ATPase component no 0.47
    8 GFF731 putative exported protein no 0.46
    9 GFF2854 Probable hydrolase no 0.45
    10 GFF1425 hypothetical protein no 0.45
    11 GFF1241 ATP-dependent DNA ligase (EC 6.5.1.1) LigC no 0.44
    12 GFF327 Surface antigen gene no 0.44
    13 GFF2084 Gfa-like protein no 0.44
    14 GFF852 hypothetical protein no 0.43
    15 GFF2462 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) no 0.43
    16 GFF3904 FIG019175: putative membrane protein no 0.43
    17 GFF4778 FIG074102: hypothetical protein no 0.42
    18 GFF805 ABC transporter ATP-binding protein 0.28 0.42
    19 GFF5692 Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein no 0.42
    20 GFF2425 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) no 0.42

    Or look for negative cofitness