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  • Top cofit genes for GFF3025 from Sphingobium sp. HT1-2

    Efflux transport system, outer membrane factor (OMF) lipoprotein
    SEED: Heavy metal RND efflux outer membrane protein, CzcC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3873 3-demethylubiquinone-9 3-methyltransferase no 0.81
    2 GFF994 TolA protein no 0.81
    3 GFF2281 Glycosyl transferase, group 1 no 0.80
    4 GFF2196 hypothetical protein no 0.79
    5 GFF3634 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.78
    6 GFF3287 hypothetical protein no 0.78
    7 GFF2124 L,D-transpeptidase no 0.77
    8 GFF884 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) 0.49 0.76
    9 GFF4638 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) no 0.76
    10 GFF3344 Mlr0862 protein no 0.75
    11 GFF979 hypothetical protein no 0.75
    12 GFF3454 ApaG protein no 0.75
    13 GFF1895 DNA repair protein RadA 0.57 0.75
    14 GFF2182 hypothetical protein no 0.74
    15 GFF4499 hypothetical protein no 0.74
    16 GFF4206 Outer membrane beta-barrel assembly protein BamE no 0.73
    17 GFF695 hypothetical protein no 0.73
    18 GFF2241 Aldose 1-epimerase no 0.73
    19 GFF4292 hypothetical protein no 0.72
    20 GFF730 DNA recombination and repair protein RecF no 0.72

    Or look for negative cofitness