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    • Top cofit genes for GFF3025 from Sphingobium sp. HT1-2

    Efflux transport system, outer membrane factor (OMF) lipoprotein
    SEED: Heavy metal RND efflux outer membrane protein, CzcC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF736 hypothetical protein no 0.77
    2 GFF325 hypothetical protein no 0.69
    3 GFF61 hypothetical protein no 0.69
    4 GFF3989 hypothetical protein no 0.68
    5 GFF3752 hypothetical protein no 0.68
    6 GFF2390 Uncharacterized membrane protein PA1577 no 0.66
    7 GFF1230 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) no 0.66
    8 GFF21 hypothetical protein no 0.65
    9 GFF4610 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.32 0.65
    10 GFF3977 hypothetical protein no 0.64
    11 GFF3012 Amidohydrolase no 0.64
    12 GFF1454 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) no 0.64
    13 GFF1909 Chorismate mutase I (EC 5.4.99.5) no 0.63
    14 GFF535 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) no 0.63
    15 GFF921 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit no 0.62
    16 GFF1397 hypothetical protein no 0.62
    17 GFF3398 L-lactate permease 0.38 0.60
    18 GFF403 Aspartate aminotransferase (EC 2.6.1.1) 0.33 0.60
    19 GFF828 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) no 0.59
    20 GFF2538 Transcriptional regulator, LysR family no 0.58

    Or look for negative cofitness