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Cofit
Protein
Homologs
Top cofit genes for GFF3019 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4304
Cyclohexanecarboxylate--CoA ligase
no
0.73
2
GFF3425
no description
no
0.64
3
GFF3904
Probable signal peptide protein
no
0.63
4
GFF1891
Transcriptional regulator, GntR family
no
0.62
5
GFF2598
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
no
0.62
6
GFF7035
UspA
no
0.62
7
GFF2006
Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
no
0.61
8
GFF1680
KEGG: GntR family transcriptional regulator
no
0.60
9
GFF3406
Benzoyl-CoA oxygenase component A
no
0.60
10
GFF6780
Energy-dependent translational throttle protein EttA
no
0.60
11
GFF3050
Lactam utilization protein LamB
no
0.60
12
GFF7380
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
no
0.59
13
GFF7250
Putative transposase InsK for insertion sequence element IS150
no
0.59
14
GFF4447
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54)
no
0.59
15
GFF3404
Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44)
no
0.58
16
GFF5509
Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
no
0.58
17
GFF2913
ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
no
0.58
18
GFF2137
Ribose operon repressor
no
0.58
19
GFF3727
Transcriptional regulator, AcrR family
no
0.58
20
GFF4492
Protein of unknown function DUF484
no
0.57
Or look for
negative cofitness