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  • Top cofit genes for GFF3019 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4304 Cyclohexanecarboxylate--CoA ligase no 0.73
    2 GFF3425 no description no 0.64
    3 GFF3904 Probable signal peptide protein no 0.63
    4 GFF1891 Transcriptional regulator, GntR family no 0.62
    5 GFF2598 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) no 0.62
    6 GFF7035 UspA no 0.62
    7 GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) no 0.61
    8 GFF1680 KEGG: GntR family transcriptional regulator no 0.60
    9 GFF3406 Benzoyl-CoA oxygenase component A no 0.60
    10 GFF6780 Energy-dependent translational throttle protein EttA no 0.60
    11 GFF3050 Lactam utilization protein LamB no 0.60
    12 GFF7380 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) no 0.59
    13 GFF7250 Putative transposase InsK for insertion sequence element IS150 no 0.59
    14 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) no 0.59
    15 GFF3404 Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44) no 0.58
    16 GFF5509 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) no 0.58
    17 GFF2913 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.58
    18 GFF2137 Ribose operon repressor no 0.58
    19 GFF3727 Transcriptional regulator, AcrR family no 0.58
    20 GFF4492 Protein of unknown function DUF484 no 0.57

    Or look for negative cofitness