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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF3018 from
Variovorax sp. SCN45
VgrG protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3738
Uncharacterized protein YraP
no
0.70
2
GFF1992
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
no
0.69
3
GFF7379
Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)
no
0.69
4
GFF6379
ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.67
5
GFF4639
Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33)
no
0.67
6
GFF348
Superoxide dismutase [Fe] (EC 1.15.1.1)
no
0.66
7
GFF3425
no description
no
0.65
8
GFF931
Methylmalonyl-CoA mutase (EC 5.4.99.2) / B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2)
no
0.64
9
GFF3800
Fumarylacetoacetate hydrolase family protein
no
0.64
10
GFF4829
Isocitrate lyase (EC 4.1.3.1)
no
0.64
11
GFF7064
Glutamate--cysteine ligase (EC 6.3.2.2)
no
0.64
12
GFF7376
Transcriptional regulator, LysR family
no
0.64
13
GFF2517
Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase
no
0.64
14
GFF4803
N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
no
0.63
15
GFF665
hypothetical protein
no
0.63
16
GFF4328
hypothetical protein
no
0.63
17
GFF4907
NAD(P) transhydrogenase C-domain of subunit alpha (EC 1.6.1.2)
no
0.63
18
GFF701
ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.63
19
GFF7381
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
no
0.62
20
GFF2055
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
0.47
0.62
Or look for
negative cofitness