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Cofit
Protein
Homologs
Top cofit genes for PS417_15430 from
Pseudomonas simiae WCS417
porin
SEED: Outer membrane porin, OprD family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_13370
short-chain dehydrogenase
no
0.26
2
PS417
_20985
porin
no
0.26
3
PS417
_23545
gamma-glutamyl kinase
no
0.25
4
PS417
_10135
phage tail protein
no
0.24
5
PS417
_24745
gamma-glutamyl phosphate reductase
no
0.23
6
PS417
_22445
ATP-dependent DNA helicase RuvB
0.27
0.22
7
PS417
_13345
MFS transporter permease
no
0.22
8
PS417
_08135
3-phosphoshikimate 1-carboxyvinyltransferase
no
0.21
9
PS417
_04810
poly(beta-D-mannuronate) lyase
0.37
0.20
10
PS417
_07705
phosphatase
no
0.20
11
PS417
_10260
peptidase
no
0.20
12
PS417
_27185
porin
no
0.19
13
PS417
_06375
deoxycytidine triphosphate deaminase
no
0.19
14
PS417
_05680
DNA mismatch repair protein MutS
no
0.19
15
PS417
_15575
histidine kinase
no
0.19
16
PS417
_01580
imidazole glycerol phosphate synthase
no
0.19
17
PS417
_27410
outer membrane usher protein
no
0.19
18
PS417
_07290
aldehyde dehydrogenase
no
0.19
19
PS417
_18815
glutathione S-transferase
no
0.19
20
PS417
_16375
2-hydroxyacid dehydrogenase
no
0.18
Or look for
negative cofitness