Top cofit genes for GFF3013 from Variovorax sp. SCN45

KEGG: type VI secretion system secreted protein Hcp

Rank Hit Name Description Conserved? Cofitness  
1 GFF1990 Transcriptional regulator, MerR family no 0.57
2 GFF3261 FIG003003: hypothetical protein no 0.56
3 GFF170 Two-component system sensor histidine kinase/response regulator hybrid no 0.55
4 GFF3297 hypothetical protein Ajs_0007 no 0.53
5 GFF6913 Ser-tRNA(Ala) deacylase @ Gly-tRNA(Ala) deacylase 0.27 0.52
6 GFF4369 no description no 0.52
7 GFF4853 Transcriptional regulator, LysR family no 0.52
8 GFF5256 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.51
9 GFF4608 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17) no 0.50
10 GFF6675 ortholog of Bordetella pertussis (BX470248) BP3300 no 0.50
11 GFF5433 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.50
12 GFF4747 Quinone oxidoreductase (EC 1.6.5.5) no 0.49
13 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) no 0.49
14 GFF2403 CHAP domain containing protein no 0.49
15 GFF2655 Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit no 0.49
16 GFF1194 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) no 0.48
17 GFF6641 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.48
18 GFF5867 no description no 0.47
19 GFF1004 Putative inner membrane protein YjeT (clustered with HflC) no 0.47
20 GFF4145 transcriptional regulators-like protein no 0.47

Or look for negative cofitness