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  • Top cofit genes for GFF3001 from Sphingobium sp. HT1-2

    Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
    SEED: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
    KEGG: arabinan endo-1,5-alpha-L-arabinosidase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF459 hypothetical protein no 0.73
    2 GFF5022 Heat shock protein 10 kDa family chaperone GroES no 0.72
    3 GFF4273 hypothetical protein no 0.69
    4 GFF4888 TonB-dependent receptor no 0.68
    5 GFF1491 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) no 0.68
    6 GFF2506 Two-component transcriptional response regulator, OmpR family no 0.66
    7 GFF618 hypothetical protein no 0.65
    8 GFF989 Psp operon transcriptional activator no 0.64
    9 GFF3761 Adenine phosphoribosyltransferase (EC 2.4.2.7) no 0.64
    10 GFF4741 hypothetical protein no 0.63
    11 GFF1509 Lipopolysaccharide biosynthesis chain length determinant protein no 0.63
    12 GFF2411 5-methyl-dCTP pyrophosphohydrolase (EC 3.6.1.-) no 0.63
    13 GFF3020 TonB-dependent receptor no 0.63
    14 GFF5150 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.63
    15 GFF5393 Response regulator receiver protein no 0.63
    16 GFF1914 NADH-ubiquinone oxidoreductase-related protein no 0.63
    17 GFF2870 hypothetical protein no 0.62
    18 GFF451 hypothetical protein no 0.62
    19 GFF1568 Efflux ABC transporter, ATP-binding protein no 0.62
    20 GFF2148 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) no 0.61

    Or look for negative cofitness