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  • Top cofit genes for PS417_00015 from Pseudomonas simiae WCS417

    recombinase RecF
    SEED: DNA recombination and repair protein RecF
    KEGG: DNA replication and repair protein RecF

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25395 excinuclease ABC subunit A 0.90 0.59
    2 PS417_18685 excinuclease ABC subunit B 0.94 0.56
    3 PS417_20800 recombination protein RecR 0.95 0.48
    4 PS417_24070 recombination and repair protein 0.83 0.45
    5 PS417_13500 ATP-dependent DNA helicase 0.61 0.43
    6 PS417_10725 excinuclease ABC subunit C 0.93 0.43
    7 PS417_05815 recombinase RecA 0.90 0.43
    8 PS417_00405 DNA polymerase I 0.81 0.40
    9 PS417_22895 tyrosine recombinase XerD 0.79 0.38
    10 PS417_27870 ATP-dependent DNA helicase RecG 0.90 0.38
    11 PS417_22445 ATP-dependent DNA helicase RuvB 0.74 0.37
    12 PS417_22855 ssDNA exonuclease RecJ 0.87 0.35
    13 PS417_15120 chromosome segregation protein SMC no 0.34
    14 PS417_27800 exodeoxyribonuclease III 0.36 0.34
    15 PS417_15110 protein BatD 0.45 0.33
    16 PS417_07635 transcription-repair coupling factor 0.81 0.33
    17 PS417_15105 membrane protein 0.28 0.33
    18 PS417_15115 exonuclease SbcD 0.50 0.32
    19 PS417_04285 protease TldD 0.60 0.32
    20 PS417_24705 D-alanyl-D-alanine carboxypeptidase 0.47 0.32

    Or look for negative cofitness