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  • Top cofit genes for GFF2999 from Variovorax sp. SCN45

    Putative transmembrane protein
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4443 Cytochrome c-type biogenesis protein ResA 0.40 0.66
    2 GFF1154 Putative transmembrane protein 0.69 0.60
    3 GFF2332 Transcriptional regulator, LysR family no 0.60
    4 GFF2302 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.48 0.58
    5 GFF5310 Cytochrome c4 0.33 0.58
    6 GFF2243 Ornithine cyclodeaminase (EC 4.3.1.12) no 0.54
    7 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA 0.57 0.53
    8 GFF6114 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.52
    9 GFF4507 no description no 0.52
    10 GFF3723 Cytochrome c5 no 0.50
    11 GFF4150 Salicylate hydroxylase (EC 1.14.13.1) no 0.50
    12 GFF1456 probable integrase/recombinase protein no 0.50
    13 GFF5811 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB-like no 0.49
    14 GFF7384 hypothetical protein no 0.49
    15 GFF3959 Uncharacterized integral membrane endopeptidase Bmul_2226 0.48 0.49
    16 GFF3488 Transcriptional regulator, GntR family no 0.48
    17 GFF580 Rhodanese domain protein UPF0176, Betaproteobacterial subgroup no 0.48
    18 GFF710 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) no 0.48
    19 GFF2305 Hypothetical protein in cytochrome oxidase biogenesis cluster no 0.48
    20 GFF1669 hypothetical protein no 0.48

    Or look for negative cofitness