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  • Top cofit genes for GFF2998 from Variovorax sp. SCN45

    Virulence factor BrkB
    SEED: Ribonuclease BN (EC 3.1.-.-)
    KEGG: membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1569 BUG/TctC family periplasmic protein no 0.64
    2 GFF3810 Conserved membrane protein in copper uptake, YcnI / Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II no 0.63
    3 GFF4667 hypothetical protein no 0.56
    4 GFF3169 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.55
    5 GFF2332 Transcriptional regulator, LysR family no 0.53
    6 GFF5266 Transaldolase (EC 2.2.1.2) 0.29 0.52
    7 GFF2087 Ser/Thr and Tyr protein phosphatase (dual specificity) no 0.52
    8 GFF4319 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.51
    9 GFF4676 hypothetical protein no 0.50
    10 GFF7346 Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS no 0.50
    11 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.49
    12 GFF5857 Fe2+-dicitrate sensor, membrane component no 0.49
    13 GFF3405 Benzoyl-CoA oxygenase component B no 0.49
    14 GFF4214 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM no 0.48
    15 GFF6236 VgrG protein no 0.48
    16 GFF2698 Transcriptional regulator, LysR family no 0.47
    17 GFF5323 Type IV pilus biogenesis protein PilQ no 0.47
    18 GFF6546 hypothetical protein no 0.47
    19 GFF1443 Excinuclease ABC subunit A paralog of unknown function no 0.47
    20 GFF4585 hypothetical protein no 0.47

    Or look for negative cofitness