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  • Top cofit genes for PS417_15305 from Pseudomonas simiae WCS417

    type VI secretion protein
    SEED: Uncharacterized protein ImpH/VasB
    KEGG: type VI secretion system protein ImpH

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24155 ATP-binding protein no 0.25
    2 PS417_04860 ATPase no 0.25
    3 PS417_16465 sirohydrochlorin ferrochelatase no 0.25
    4 PS417_26040 malate synthase no 0.24
    5 PS417_27875 histidine kinase 0.29 0.24
    6 PS417_12290 sulfite reductase no 0.24
    7 PS417_21750 acetyl-CoA synthetase 0.29 0.22
    8 PS417_24395 hemolysin D no 0.21
    9 PS417_20985 porin no 0.21
    10 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase no 0.21
    11 PS417_12640 GNAT family acetyltransferase no 0.20
    12 PS417_07995 LOG family protein 0.49 0.20
    13 PS417_18560 N-(5'-phosphoribosyl)anthranilate isomerase 0.32 0.20
    14 PS417_01850 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) no 0.20
    15 PS417_18600 isopropylmalate isomerase no 0.20
    16 PS417_00915 aminotransferase 0.37 0.20
    17 PS417_25715 anthranilate phosphoribosyltransferase no 0.20
    18 PS417_00180 tryptophan synthase subunit alpha no 0.20
    19 PS417_02415 phosphoserine phosphatase no 0.20
    20 PS417_26745 methionine biosynthesis protein MetW 0.31 0.20

    Or look for negative cofitness