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Cofit
Protein
Homologs
Top cofit genes for GFF299 from
Variovorax sp. SCN45
Ribosomal silencing factor RsfA
KEGG: ribosome-associated protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF268
Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)
no
0.83
2
GFF561
Ribonucleotide reductase transcriptional regulator NrdR
no
0.83
3
GFF7381
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
no
0.83
4
GFF6381
ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.83
5
GFF488
ATP-dependent Clp protease ATP-binding subunit ClpX
no
0.83
6
GFF272
thioesterase superfamily protein
no
0.82
7
GFF2987
CBS domain protein
no
0.82
8
GFF4492
Protein of unknown function DUF484
no
0.82
9
GFF1098
Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)
no
0.82
10
GFF270
2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117)
no
0.82
11
GFF2572
Protein-export protein SecB (maintains pre-export unfolded state)
no
0.82
12
GFF1003
HflC protein
no
0.82
13
GFF7115
hypothetical protein
no
0.82
14
GFF2818
Phosphoenolpyruvate synthase (EC 2.7.9.2)
no
0.81
15
GFF7293
Ribosome hibernation promoting factor Hpf
no
0.81
16
GFF902
Transcriptional regulator, AsnC family
no
0.81
17
GFF3755
Transcriptional regulator, GntR family
no
0.81
18
GFF1899
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
no
0.81
19
GFF2128
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.81
20
GFF575
Tol-Pal system protein TolQ
no
0.81
Or look for
negative cofitness