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  • Top cofit genes for GFF2987 from Hydrogenophaga sp. GW460-11-11-14-LB1

    TRAP-type C4-dicarboxylate transport system, periplasmic component
    SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF240 SlyX protein no 0.67
    2 GFF5215 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) no 0.65
    3 GFF4461 UPF0028 protein YchK no 0.64
    4 GFF5315 hypothetical protein no 0.64
    5 GFF5313 Superfamily II DNA/RNA helicases, SNF2 family no 0.63
    6 GFF1044 Copper-containing nitrite reductase (EC 1.7.2.1) no 0.63
    7 GFF2921 Cytochrome b no 0.63
    8 GFF1778 ATP-dependent DNA helicase Rep no 0.63
    9 GFF1097 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) no 0.63
    10 GFF4897 Transcription elongation factor GreA no 0.62
    11 GFF1787 Nitrogen regulation protein NtrY (EC 2.7.3.-) no 0.61
    12 GFF991 hypothetical protein no 0.61
    13 GFF4089 Flagellar biosynthesis protein FliR no 0.61
    14 GFF4464 Methyltransferase FkbM no 0.61
    15 GFF5414 Cytochrome c551 NirM no 0.61
    16 GFF3706 hypothetical protein no 0.61
    17 GFF3806 S-adenosylmethionine:2-demethylmenaquinone methyltransferase (EC 2.1.-.-) no 0.61
    18 GFF3016 FIG143263: Glycosyl transferase no 0.61
    19 GFF926 MaoC family protein no 0.60
    20 GFF1788 Probable proline rich signal peptide protein no 0.60

    Or look for negative cofitness