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  • Top cofit genes for PS417_15270 from Pseudomonas simiae WCS417

    membrane protein
    SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
    KEGG: type VI secretion system protein ImpK

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17065 catalase no 0.26
    2 PS417_24275 diguanylate phosphodiesterase 0.56 0.23
    3 PS417_00040 ATPase no 0.23
    4 PS417_00745 outer membrane N-deacetylase 0.25 0.21
    5 PS417_07280 LysR family transcriptional regulator 0.37 0.20
    6 PS417_05970 chemotaxis protein CheR no 0.20
    7 PS417_00625 taurine dioxygenase 0.40 0.20
    8 PS417_05400 hypothetical protein no 0.20
    9 PS417_11235 hypothetical protein no 0.19
    10 PS417_00025 transcriptional regulator no 0.19
    11 PS417_11605 urea ABC transporter permease no 0.19
    12 PS417_12485 hypothetical protein no 0.19
    13 PS417_23470 histidine kinase 0.23 0.18
    14 PS417_04950 hypothetical protein no 0.18
    15 PS417_10420 shikimate dehydrogenase no 0.18
    16 PS417_13930 cbb3-type cytochrome c oxidase subunit I no 0.18
    17 PS417_00150 4,5-dioxygenase no 0.18
    18 PS417_19030 sodium:dicarboxylate symporter no 0.18
    19 PS417_00740 membrane protein no 0.18
    20 PS417_01385 NAD-dependent dehydratase no 0.18

    Or look for negative cofitness