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    • Top cofit genes for GFF2983 from Variovorax sp. SCN45

    Transcriptional regulator YfeR, LysR family
    SEED: LysR family transcriptional regulator YfeR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2976 hypothetical protein no 0.51
    2 GFF3994 hypothetical protein no 0.50
    3 GFF7328 no description no 0.49
    4 GFF3956 no description no 0.49
    5 GFF2230 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) no 0.48
    6 GFF5461 2-dehydrotetronate isomerase (EC 5.3.1.35) no 0.47
    7 GFF1412 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) no 0.46
    8 GFF1404 hypothetical protein no 0.46
    9 GFF1730 Dihydrofolate reductase homolog no 0.45
    10 GFF3249 Guanyl-specific ribonuclease (EC 3.1.27.3) no 0.45
    11 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) no 0.45
    12 GFF2997 FIG027190: Putative transmembrane protein no 0.44
    13 GFF2656 Acyltransferase 3 no 0.44
    14 GFF1698 BUG/TctC family periplasmic protein no 0.44
    15 GFF4212 Methionine gamma-lyase (EC 4.4.1.11) no 0.44
    16 GFF1489 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like no 0.44
    17 GFF4230 Transcriptional regulator of pyridoxine metabolism / Pyridoxamine phosphate aminotransferase (EC 2.6.1.54) no 0.44
    18 GFF2032 Excinuclease ABC subunit A, dimeric form no 0.44
    19 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.43
    20 GFF7281 no description no 0.42

    Or look for negative cofitness