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  • Top cofit genes for PS417_15265 from Pseudomonas simiae WCS417

    type VI secretion protein VasK
    SEED: IcmF-related protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02435 flagellar motor protein MotA no 0.50
    2 PS417_15260 protein phosphatase 0.64 0.50
    3 PS417_26055 cyclic nucleotide-binding protein 0.29 0.45
    4 PS417_01395 biofilm formation protein PelB no 0.45
    5 PS417_01415 glycosyl transferase family 1 no 0.44
    6 PS417_01420 histidine kinase no 0.44
    7 PS417_15255 serine/threonine protein kinase 0.28 0.44
    8 PS417_02440 flagellar motor protein MotB 0.29 0.39
    9 PS417_01405 sugar transporter 0.30 0.39
    10 PS417_01410 transporter no 0.37
    11 PS417_27335 flagellar basal body protein FliL no 0.36
    12 PS417_01390 PbsX family transcriptional regulator no 0.36
    13 PS417_01400 hypothetical protein no 0.34
    14 PS417_23760 DeoR faimly transcriptional regulator no 0.34
    15 PS417_00915 aminotransferase no 0.34
    16 PS417_11900 conjugal transfer protein TraR no 0.33
    17 PS417_21045 cysteine synthase no 0.33
    18 PS417_05680 DNA mismatch repair protein MutS no 0.33
    19 PS417_27875 histidine kinase no 0.33
    20 PS417_22480 ferritin no 0.32

    Or look for negative cofitness