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Cofit
Protein
Homologs
Top cofit genes for GFF2981 from
Variovorax sp. SCN45
no description
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2153
type IV pili signal transduction protein PilI
no
0.64
2
GFF4973
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
no
0.62
3
GFF5946
T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA
no
0.61
4
GFF6075
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
0.31
0.58
5
GFF3825
Autolysin sensor kinase (EC 2.7.3.-)
0.29
0.57
6
GFF1954
no description
no
0.57
7
GFF993
Type IV pilus biogenesis protein PilF
0.37
0.56
8
GFF5319
Type IV pilus biogenesis protein PilM
0.31
0.56
9
GFF778
Channel-forming transporter/cytolysins activator of TpsB family
no
0.55
10
GFF5418
Type IV fimbrial biogenesis protein PilY1
no
0.55
11
GFF5128
hypothetical protein
no
0.55
12
GFF5320
Type IV pilus biogenesis protein PilN
0.29
0.55
13
GFF5416
Type IV fimbrial biogenesis protein PilW
no
0.55
14
GFF3068
FIG00538108: hypothetical protein
0.32
0.55
15
GFF4432
Two-component system response regulator protein
0.31
0.54
16
GFF2519
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
0.32
0.54
17
GFF5417
hypothetical protein
no
0.54
18
GFF3826
Response regulator receiver:LytTr DNA-binding region
0.32
0.54
19
GFF2509
Type IV fimbrial assembly protein PilC
0.32
0.54
20
GFF6290
RNA polymerase sigma-54 factor RpoN
no
0.54
Or look for
negative cofitness