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  • Top cofit genes for GFF2978 from Variovorax sp. SCN45

    Aromatic ring-cleaving dioxygenase
    SEED: Aromatic ring-cleaving dioxygenase
    KEGG: DOPA 4,5-dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2182 Inner membrane component of TAM transport system no 0.55
    2 GFF1072 no description no 0.55
    3 GFF2627 Chorismate synthase (EC 4.2.3.5) no 0.54
    4 GFF5456 L-threonate/D-erythronate transcriptional regulator, GntR family no 0.54
    5 GFF83 Alkanal monooxygenase alpha chain (EC 1.14.14.3) no 0.53
    6 GFF2900 Subtilisin-like serine proteases no 0.51
    7 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27) no 0.51
    8 GFF695 Cytochrome B561 no 0.51
    9 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA no 0.51
    10 GFF5576 Acyl-CoA dehydrogenase no 0.50
    11 GFF3056 Nitrogen assimilation regulatory protein Nac no 0.50
    12 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) no 0.50
    13 GFF1587 no description no 0.50
    14 GFF2438 Ferrichrome-iron receptor no 0.50
    15 GFF2216 Uncharacterized protein Tbd_1903 no 0.50
    16 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.49
    17 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.49
    18 GFF5324 Shikimate kinase I (EC 2.7.1.71) no 0.49
    19 GFF943 Intracellular PHB depolymerase no 0.49
    20 GFF4704 Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-) no 0.49

    Or look for negative cofitness