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  • Top cofit genes for GFF2971 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF648 integral membrane sensor signal transduction histidine kinase no 0.60
    2 GFF3115 Methionine ABC transporter substrate-binding protein no 0.57
    3 GFF1606 Cys-tRNA(Pro) deacylase YbaK no 0.51
    4 GFF1684 no description no 0.49
    5 GFF3228 hypothetical protein no 0.49
    6 GFF443 Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family no 0.49
    7 GFF4192 no description no 0.49
    8 GFF694 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-) no 0.48
    9 GFF1688 FIG00828468: hypothetical protein no 0.48
    10 GFF7062 probable carboxylesterase no 0.48
    11 GFF3162 Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) no 0.47
    12 GFF6334 no description no 0.47
    13 GFF4214 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM 0.41 0.47
    14 GFF6008 Citrate synthase (si) (EC 2.3.3.1) no 0.47
    15 GFF3810 Conserved membrane protein in copper uptake, YcnI / Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II no 0.47
    16 GFF1338 ABC transporter, permease protein 1 RSc1751 no 0.47
    17 GFF482 Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) no 0.46
    18 GFF6236 VgrG protein no 0.46
    19 GFF6626 ISPsy6, transposase no 0.46
    20 GFF1441 putative membrane protein no 0.46

    Or look for negative cofitness