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  • Top cofit genes for GFF2962 from Hydrogenophaga sp. GW460-11-11-14-LB1

    Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2107 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.52
    2 GFF3780 4-hydroxybenzoyl-CoA thioesterase family active site no 0.51
    3 GFF3646 RNA polymerase sigma-54 factor RpoN no 0.49
    4 GFF1195 Sigma-54 dependent response regulator no 0.48
    5 GFF1070 Mobile element protein no 0.47
    6 GFF4433 Type IV secretion system protein VirD4 no 0.45
    7 GFF852 hypothetical protein no 0.45
    8 GFF2117 Sigma-fimbriae tip adhesin no 0.45
    9 GFF1328 Transposase and inactivated derivatives no 0.44
    10 GFF5472 iron-chelator utilization protein no 0.43
    11 GFF327 Surface antigen gene no 0.42
    12 GFF2571 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake no 0.42
    13 GFF2200 Transketolase (EC 2.2.1.1) no 0.42
    14 GFF1777 Auxin Efflux Carrier no 0.42
    15 GFF605 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.41
    16 GFF2994 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.41
    17 GFF842 FIG007317: Chromosome segregation protein SMC-like no 0.41
    18 GFF1581 hypothetical protein no 0.41
    19 GFF1410 Flagellar basal-body rod protein FlgG no 0.40
    20 GFF2063 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no 0.40

    Or look for negative cofitness