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Cofit
Protein
Homologs
Top cofit genes for PS417_15155 from
Pseudomonas simiae WCS417
RND transporter
SEED: FIG005548: transport protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_03535
type III secretion protein
0.70
0.28
2
PS417
_16370
chemotaxis protein CheY
0.82
0.27
3
PS417
_10720
chemotaxis protein CheY
0.83
0.26
4
PS417
_17640
macrolide ABC transporter ATP-binding protein
no
0.24
5
PS417
_28265
pyridoxamine kinase
no
0.23
6
PS417
_13940
racemase
no
0.23
7
PS417
_09635
mannose-1-phosphate guanylyltransferase
0.73
0.23
8
PS417
_06365
RNA polymerase sigma factor
0.34
0.23
9
PS417
_22740
imelysin
no
0.22
10
PS417
_12475
hypothetical protein
no
0.22
11
PS417
_25065
hypothetical protein
no
0.22
12
PS417
_11315
hemagglutinin
no
0.22
13
PS417
_05575
Glycerol kinase (EC 2.7.1.30)
(from data)
no
0.22
14
PS417
_07750
hypothetical protein
no
0.22
15
PS417
_22625
enoyl-CoA hydratase
no
0.22
16
PS417
_08985
histidine kinase
0.29
0.22
17
PS417
_05210
copper oxidase
no
0.22
18
PS417
_23950
polynucleotide phosphorylase/polyadenylase
0.53
0.22
19
PS417
_25105
hypothetical protein
no
0.22
20
PS417
_16160
ABC transporter substrate-binding protein
no
0.22
Or look for
negative cofitness