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Cofit
Protein
Homologs
Top cofit genes for GFF2956 from
Variovorax sp. SCN45
Uncharacterized protein YfaT
KEGG: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2716
2-dehydro-3-deoxygluconokinase (EC 2.7.1.45)
0.24
0.58
2
GFF7178
Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)
no
0.54
3
GFF11
Two-component transcriptional response regulator, OmpR family
no
0.53
4
GFF712
ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose)
no
0.50
5
GFF1670
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
no
0.49
6
GFF3267
RNA-binding protein
no
0.49
7
GFF6011
putative decarboxylase
no
0.49
8
GFF1544
Two-component system sensor histidine kinase/response regulator hybrid
no
0.48
9
GFF3189
hypothetical protein
no
0.48
10
GFF1479
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.48
11
GFF3865
Sigma factor RpoE negative regulatory protein RseB precursor
no
0.47
12
GFF2394
MotA/TolQ/ExbB proton channel family protein
no
0.47
13
GFF2056
Septum-associated rare lipoprotein A
no
0.47
14
GFF1836
Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)
no
0.46
15
GFF3591
Glutathione reductase (EC 1.8.1.7)
0.62
0.46
16
GFF1286
FIG00932541: hypothetical protein
no
0.46
17
GFF860
Cocaine esterase (EC 3.1.1.-)
no
0.46
18
GFF4310
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.45
19
GFF6461
Thioesterase superfamily
no
0.45
20
GFF6906
Transcriptional regulator, MarR family
0.30
0.45
Or look for
negative cofitness