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  • Top cofit genes for PS417_15120 from Pseudomonas simiae WCS417

    chromosome segregation protein SMC
    SEED: Exonuclease SbcC
    KEGG: exonuclease SbcC

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_15115 exonuclease SbcD 0.47 0.60
    2 PS417_25395 excinuclease ABC subunit A 0.41 0.55
    3 PS417_24070 recombination and repair protein 0.59 0.53
    4 PS417_13500 ATP-dependent DNA helicase 0.30 0.51
    5 PS417_24305 DNA repair protein RadA 0.45 0.47
    6 PS417_18685 excinuclease ABC subunit B 0.15 0.46
    7 PS417_20800 recombination protein RecR 0.33 0.41
    8 PS417_10725 excinuclease ABC subunit C 0.34 0.38
    9 PS417_05815 recombinase RecA 0.36 0.37
    10 PS417_00015 recombinase RecF 0.26 0.34
    11 PS417_22895 tyrosine recombinase XerD no 0.31
    12 PS417_24780 peptidase C13 0.45 0.28
    13 PS417_05695 transcriptional regulator no 0.28
    14 PS417_03280 chromosome partitioning protein ParA 0.18 0.28
    15 PS417_07530 multidrug transporter no 0.28
    16 PS417_22575 exonuclease I 0.33 0.28
    17 PS417_22855 ssDNA exonuclease RecJ no 0.27
    18 PS417_00405 DNA polymerase I 0.44 0.26
    19 PS417_20850 hypothetical protein 0.11 0.25
    20 PS417_02555 exoribonuclease R 0.33 0.25

    Or look for negative cofitness