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  • Top cofit genes for PS417_15115 from Pseudomonas simiae WCS417

    exonuclease SbcD
    SEED: Exonuclease SbcD
    KEGG: exonuclease SbcD

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_15120 chromosome segregation protein SMC 0.47 0.60
    2 PS417_24070 recombination and repair protein 0.65 0.53
    3 PS417_25395 excinuclease ABC subunit A 0.59 0.50
    4 PS417_18685 excinuclease ABC subunit B 0.44 0.46
    5 PS417_20800 recombination protein RecR 0.38 0.44
    6 PS417_10725 excinuclease ABC subunit C 0.47 0.43
    7 PS417_13500 ATP-dependent DNA helicase 0.28 0.43
    8 PS417_24305 DNA repair protein RadA 0.40 0.41
    9 PS417_05815 recombinase RecA 0.37 0.38
    10 PS417_22895 tyrosine recombinase XerD 0.36 0.34
    11 PS417_00405 DNA polymerase I 0.44 0.34
    12 PS417_00015 recombinase RecF 0.26 0.32
    13 PS417_22575 exonuclease I 0.52 0.32
    14 PS417_05820 recombinase RecX no 0.32
    15 PS417_07635 transcription-repair coupling factor 0.41 0.29
    16 PS417_20850 hypothetical protein no 0.29
    17 PS417_04170 stringent starvation protein A 0.45 0.28
    18 PS417_22855 ssDNA exonuclease RecJ 0.92 0.27
    19 PS417_23825 penicillin-binding protein 0.63 0.27
    20 PS417_07530 multidrug transporter 0.41 0.25

    Or look for negative cofitness