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  • Top cofit genes for PS417_01505 from Pseudomonas simiae WCS417

    gamma-aminobutyrate transporter
    SEED: transport permease protein of gamma-aminobutyrate
    KEGG: amino acid transporter, AAT family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12895 pyruvate dehydrogenase no 0.60
    2 PS417_23700 aromatic amino acid transporter 0.36 0.33
    3 PS417_28135 sodium:alanine symporter 0.55 0.32
    4 PS417_01805 amino acid ABC transporter substrate-binding protein 0.21 0.31
    5 PS417_26985 phosphoenolpyruvate-protein phosphotransferase no 0.31
    6 PS417_26125 glutathione S-transferase 0.28 0.28
    7 PS417_02655 amino acid ABC transporter substrate-binding protein 0.38 0.27
    8 PS417_02665 branched-chain amino acid ABC transporter permease 0.56 0.26
    9 PS417_22235 aromatic amino acid transporter no 0.26
    10 PS417_08945 heat shock protein 90 0.85 0.25
    11 PS417_02660 branched-chain amino acid transporter permease subunit LivH 0.60 0.25
    12 PS417_24360 aldehyde oxidase no 0.24
    13 PS417_20930 50S rRNA methyltransferase 0.21 0.24
    14 PS417_26205 threonine aldolase no 0.24
    15 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein 0.58 0.22
    16 PS417_25910 amine oxidase 0.29 0.22
    17 PS417_28350 fatty acid methyltransferase no 0.22
    18 PS417_20980 uroporphyrin-III methyltransferase 0.20 0.22
    19 PS417_17995 hypothetical protein no 0.21
    20 PS417_27245 aminotransferase DegT 0.68 0.21

    Or look for negative cofitness