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  • Top cofit genes for PS417_15055 from Pseudomonas simiae WCS417

    C4-dicarboxylate ABC transporter
    SEED: probable dicarboxylate transporter
    KEGG: aerobic C4-dicarboxylate transport protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01495 amino acid ABC transporter 0.52 0.26
    2 PS417_00045 glycerol acyltransferase no 0.23
    3 PS417_15775 short-chain dehydrogenase 0.61 0.21
    4 PS417_18055 general secretion pathway protein GspK no 0.21
    5 PS417_18795 LysR family transcriptional regulator 0.25 0.21
    6 PS417_04035 hypothetical protein no 0.21
    7 PS417_21925 short-chain dehydrogenase no 0.20
    8 PS417_03235 xanthine permease XanP no 0.20
    9 PS417_10335 peroxiredoxin no 0.20
    10 PS417_09645 TonB-dependent receptor no 0.20
    11 PS417_09620 lipopolysaccharide biosynthesis protein no 0.19
    12 PS417_13280 TonB-dependent receptor no 0.19
    13 PS417_05490 fatty acid desaturase no 0.19
    14 PS417_06900 hypothetical protein no 0.19
    15 PS417_18280 transporter no 0.18
    16 PS417_18230 amidase 0.13 0.18
    17 PS417_05545 amino acid ABC transporter ATP-binding protein 0.24 0.18
    18 PS417_24115 hypothetical protein no 0.18
    19 PS417_06420 ATP-dependent DNA ligase no 0.18
    20 PS417_02960 ribosomal protein L11 methyltransferase 0.68 0.18

    Or look for negative cofitness