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  • Top cofit genes for PS417_01500 from Pseudomonas simiae WCS417

    amino acid transporter
    SEED: Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
    KEGG: polar amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04340 ribosome hibernation promoting factor HPF 0.59 0.27
    2 PS417_01485 ABC transporter permease 0.80 0.26
    3 PS417_14835 amidase 0.28 0.25
    4 PS417_20635 ABC transporter ATP-binding protein no 0.24
    5 PS417_25120 capsular biosynthesis protein no 0.24
    6 PS417_06280 ribonuclease HII 0.56 0.21
    7 PS417_26050 response regulator no 0.20
    8 PS417_26235 (Fe-S)-binding protein 0.54 0.20
    9 PS417_00335 cytochrome B561 no 0.19
    10 PS417_25100 hypothetical protein no 0.19
    11 PS417_26985 phosphoenolpyruvate-protein phosphotransferase 0.24 0.19
    12 PS417_22250 pseudouridine synthase no 0.19
    13 PS417_27735 phospholipase 0.20 0.18
    14 PS417_26345 choline dehydrogenase 0.56 0.18
    15 PS417_20680 multidrug DMT transporter permease 0.62 0.18
    16 PS417_22125 porin 0.48 0.18
    17 PS417_02725 hypothetical protein no 0.18
    18 PS417_01495 amino acid ABC transporter 0.79 0.18
    19 PS417_26230 electron transfer flavoprotein subunit alpha 0.58 0.18
    20 PS417_06245 zinc metallopeptidase RseP 0.41 0.18

    Or look for negative cofitness