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  • Top cofit genes for GFF2920 from Variovorax sp. SCN45

    TRAP-type C4-dicarboxylate transport system, large permease component
    SEED: TRAP-type C4-dicarboxylate transport system, large permease component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5481 hypothetical protein no 0.61
    2 GFF1600 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.60
    3 GFF5004 N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) no 0.59
    4 GFF5816 no description no 0.57
    5 GFF736 hypothetical protein no 0.55
    6 GFF3556 BUG/TctC family periplasmic protein no 0.53
    7 GFF1579 hypothetical protein no 0.51
    8 GFF1823 Mg(2+)-transport-ATPase-associated protein MgtC no 0.51
    9 GFF6566 hypothetical protein no 0.50
    10 GFF6615 putative plasmid stabilization protein no 0.50
    11 GFF3748 KEGG: dihydrodipicolinate synthase no 0.50
    12 GFF6091 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) 0.46 0.49
    13 GFF5976 Transcriptional regulator, AraC family no 0.49
    14 GFF3056 Nitrogen assimilation regulatory protein Nac no 0.49
    15 GFF2495 Ornithine cyclodeaminase (EC 4.3.1.12) no 0.49
    16 GFF2129 small multidrug resistance family (SMR) protein no 0.48
    17 GFF4806 Arsenate reductase (EC 1.20.4.1) glutaredoxin-coupled, glutaredoxin-like family 0.46 0.48
    18 GFF6567 hypothetical protein no 0.48
    19 GFF2336 Transcriptional regulator, AraC family no 0.47
    20 GFF4290 MaoC-like dehydratase no 0.47

    Or look for negative cofitness