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  • Top cofit genes for GFF2918 from Variovorax sp. SCN45

    TRAP-type C4-dicarboxylate transport system, periplasmic component
    SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3165 Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2) no 0.60
    2 GFF2393 Biopolymer transport protein ExbD/TolR no 0.59
    3 GFF1360 3-demethylubiquinol 3-O-methyltransferase (EC 2.1.1.64) @ 2-polyprenyl-6-hydroxyphenyl methylase (EC 2.1.1.222) no 0.57
    4 GFF7249 no description no 0.55
    5 GFF3207 hypothetical protein no 0.50
    6 GFF7253 Mobile element protein no 0.49
    7 GFF2970 BUG/TctC family periplasmic protein no 0.49
    8 GFF2584 Sulfate permease no 0.49
    9 GFF2647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.48
    10 GFF727 FIG01964566: Predicted membrane protein, hemolysin III homolog no 0.48
    11 GFF2207 Flp pilus assembly protein TadB no 0.48
    12 GFF3407 MaoC domain protein no 0.47
    13 GFF6323 Benzoate transport protein no 0.47
    14 GFF52 Polyketide synthase modules and related proteins no 0.47
    15 GFF2673 FIG00655207: hypothetical protein no 0.46
    16 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) 0.79 0.46
    17 GFF2903 no description no 0.46
    18 GFF4983 fumarate reductase/succinate dehydrogenase flavoprotein-like no 0.46
    19 GFF2957 UPF0192 protein YfaS no 0.45
    20 GFF2248 Transcriptional regulatory protein RtcR no 0.45

    Or look for negative cofitness