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  • Top cofit genes for PS417_14905 from Pseudomonas simiae WCS417

    C4-dicarboxylate ABC transporter
    SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
    KEGG: C4-dicarboxylate transporter, DctQ subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21200 acyl-phosphate glycerol 3-phosphate acyltransferase no 0.22
    2 PS417_18085 general secretion pathway protein GspE no 0.20
    3 PS417_21400 TetR family transcriptional regulator no 0.19
    4 PS417_11390 LysR family transcriptional regulator no 0.19
    5 PS417_15815 hydrolase no 0.19
    6 PS417_26080 TonB-dependent receptor no 0.18
    7 PS417_09600 glycosyl transferase family 1 no 0.18
    8 PS417_15155 RND transporter 0.57 0.18
    9 PS417_23085 permease no 0.18
    10 PS417_14735 Nitrate reductase (EC 1.7.99.4) (from data) no 0.18
    11 PS417_03910 pilus assembly protein no 0.17
    12 PS417_02255 lipopolysaccharide kinase no 0.17
    13 PS417_14845 endoribonuclease L-PSP no 0.17
    14 PS417_24950 hypothetical protein no 0.17
    15 PS417_15520 hypothetical protein no 0.17
    16 PS417_17910 APC family amino acid permease 0.14 0.17
    17 PS417_10770 transglycosylase no 0.17
    18 PS417_26775 thiazole synthase no 0.16
    19 PS417_07900 hypothetical protein no 0.16
    20 PS417_14400 hypothetical protein no 0.16

    Or look for negative cofitness