• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_14900 from Pseudomonas simiae WCS417

    C4-dicarboxylate ABC transporter permease
    SEED: TRAP-type C4-dicarboxylate transport system, large permease component
    KEGG: C4-dicarboxylate transporter, DctM subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01750 histidine ammonia-lyase no 0.23
    2 PS417_09500 glucose 1-dehydrogenase no 0.20
    3 PS417_24860 hypothetical protein no 0.20
    4 PS417_12175 peptide ABC transporter permease no 0.20
    5 PS417_06445 iron-siderophore ABC transporter permease no 0.18
    6 PS417_16945 LuxR family transcriptional regulator no 0.18
    7 PS417_01245 hypothetical protein no 0.18
    8 PS417_17800 microcin B17-processing protein McbD no 0.17
    9 PS417_16765 transporter no 0.17
    10 PS417_08530 spermidine synthase 0.44 0.17
    11 PS417_09925 hypothetical protein no 0.17
    12 PS417_09365 MFS transporter no 0.17
    13 PS417_26725 hypothetical protein no 0.17
    14 PS417_11040 aldose epimerase no 0.17
    15 PS417_21340 short-chain dehydrogenase no 0.16
    16 PS417_22215 membrane protein 0.29 0.16
    17 PS417_17335 TetR family transcriptional regulator no 0.16
    18 PS417_04820 poly(beta-D-mannuronate) C5 epimerase no 0.16
    19 PS417_26040 malate synthase no 0.16
    20 PS417_01120 choline transporter no 0.16

    Or look for negative cofitness