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  • Top cofit genes for GFF2912 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF647 Two-component system response regulator QseB no 0.56
    2 GFF467 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.55
    3 GFF66 hypothetical protein no 0.52
    4 GFF6440 Molybdate-binding domain of ModE no 0.52
    5 GFF1630 Esterase/lipase no 0.51
    6 GFF862 hypothetical protein no 0.51
    7 GFF504 SAM-dependent methyltransferases no 0.51
    8 GFF2972 Radical SAM domain protein no 0.50
    9 GFF2559 hypothetical protein no 0.50
    10 GFF620 Transcriptional regulator, LysR family no 0.49
    11 GFF1564 Prevent host death protein, Phd antitoxin no 0.47
    12 GFF3128 T6SS PAAR-repeat protein / RhaS protein no 0.47
    13 GFF7360 Urea ABC transporter, substrate-binding protein UrtA no 0.46
    14 GFF3458 Rubisco activation protein CbbQ no 0.45
    15 GFF3159 Sulfite dehydrogenase (quinone), molybdopterin-containing subunit SoeA (EC 1.8.5.6) no 0.45
    16 GFF908 Putative oxidoreductase no 0.45
    17 GFF4104 Cystathionine beta-lyase (EC 4.4.1.8) no 0.45
    18 GFF7067 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.45
    19 GFF860 Cocaine esterase (EC 3.1.1.-) no 0.44
    20 GFF201 Probable ferredoxin oxidoreductase oxidoreductase protein (EC 1.-.-.- ) no 0.44

    Or look for negative cofitness