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  • Top cofit genes for GFF2908 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3168 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) no 0.52
    2 GFF2926 FIG00349048: hypothetical protein no 0.52
    3 GFF4553 RNA chaperone ProQ no 0.52
    4 GFF4305 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.52
    5 GFF7138 ATP-dependent 23S rRNA helicase DbpA no 0.51
    6 GFF1617 Phosphonate uptake and metabolism regulator, LysR-family no 0.51
    7 GFF4877 no description no 0.50
    8 GFF3052 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) no 0.50
    9 GFF6887 Transporter, LysE family no 0.50
    10 GFF4086 no description no 0.48
    11 GFF4133 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; sulfonate monooxygenase no 0.48
    12 GFF4965 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.48
    13 GFF5432 Glutathione S-transferase family protein no 0.48
    14 GFF7206 no description no 0.47
    15 GFF6547 Glutathione S-transferase (EC 2.5.1.18) no 0.47
    16 GFF2342 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.47
    17 GFF754 FIG00975093: hypothetical protein no 0.47
    18 GFF5921 T6SS protein serine/threonine phosphatase PppA no 0.47
    19 GFF5934 hypothetical protein no 0.46
    20 GFF365 Acyl-CoA dehydrogenase no 0.46

    Or look for negative cofitness