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  • Top cofit genes for GFF2907 from Variovorax sp. SCN45

    Glucarate dehydratase (EC 4.2.1.40)
    SEED: Glucarate dehydratase (EC 4.2.1.40)
    KEGG: glucarate dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3541 hypothetical protein no 0.58
    2 GFF3565 Acyl-CoA dehydrogenase no 0.56
    3 GFF5193 Galactofuranose ABC transporter, substrate-binding protein 0.22 0.56
    4 GFF3787 Biotin carboxylase (EC 6.3.4.14) 0.28 0.56
    5 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.54
    6 GFF4124 no description no 0.54
    7 GFF4458 hypothetical protein no 0.52
    8 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.51
    9 GFF2960 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.51
    10 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.50
    11 GFF1063 dioxygenase, TauD/TfdA family no 0.50
    12 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) no 0.49
    13 GFF102 General secretion pathway protein F no 0.49
    14 GFF1518 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.49
    15 GFF1542 Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3) no 0.48
    16 GFF3235 no description no 0.48
    17 GFF2450 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) 0.44 0.48
    18 GFF4794 Ectoine hydroxylase (EC 1.17.-.-) no 0.48
    19 GFF4935 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.48
    20 GFF1842 Transcriptional regulator, LysR family 0.35 0.47

    Or look for negative cofitness