Top cofit genes for GFF2907 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

HTH-type transcriptional regulator hdfR
SEED: HTH-type transcriptional regulator hdfR

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF2906		Protein yifE	0.99	0.87
2	GFF4789		Lipoprotein NlpD	0.32	0.84
3	GFF4788		RNA polymerase sigma factor RpoS	0.91	0.84
4	GFF716		L,D-transpeptidase YbiS	0.84	0.80
5	GFF870		FIG00614015: hypothetical protein	0.94	0.79
6	GFF2698		Exoribonuclease II (EC 3.1.13.1)	0.54	0.79
7	GFF1311		FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated	0.36	0.78
8	GFF1503		Lipoprotein nlpI precursor	0.61	0.78
9	GFF2016		Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)	no	0.78
10	GFF4839		BarA sensory histidine kinase (= VarS = GacS)	0.83	0.77
11	GFF3146		'3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)' transl_table=11	0.42	0.76
12	GFF3613		Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps	0.48	0.75
13	GFF2303		Putative uncharacterized protein YiiQ	no	0.75
14	GFF1058		NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)	0.29	0.74
15	GFF3996		DNA-cytosine methyltransferase (EC 2.1.1.37)	no	0.74
16	GFF4103		probable exported protein STY0357	0.54	0.74
17	GFF3054		Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC	0.68	0.73
18	GFF1423		Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57)	0.30	0.73
19	GFF1830		Two-component sensor protein RcsD (EC 2.7.3.-)	no	0.72
20	GFF3886		UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)	0.68	0.72

Or look for negative cofitness