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Cofit
Protein
Homologs
Top cofit genes for GFF2905 from
Variovorax sp. SCN45
surface antigen gene
SEED: surface antigen gene
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF424
Cobalamin synthase (EC 2.7.8.26)
no
0.65
2
GFF6070
Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13)
no
0.61
3
GFF1962
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
no
0.61
4
GFF343
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
no
0.59
5
GFF6884
FIG00932717: hypothetical protein
no
0.59
6
GFF4006
DNA polymerase I (EC 2.7.7.7)
no
0.58
7
GFF4095
no description
no
0.58
8
GFF2564
Two-component transcriptional response regulator, LuxR family
no
0.58
9
GFF4438
Sugar kinases, ribokinase family
no
0.58
10
GFF2855
Putative hydrolase or acyltransferase
no
0.57
11
GFF2046
no description
no
0.57
12
GFF2815
Primosomal replication protein N
no
0.57
13
GFF2065
Peptidase, M23/M37 family
no
0.57
14
GFF417
Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
no
0.57
15
GFF6193
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.57
16
GFF2013
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
no
0.56
17
GFF4398
Transcriptional regulator, AcrR family
no
0.56
18
GFF3800
Fumarylacetoacetate hydrolase family protein
no
0.56
19
GFF3250
Barstar, ribonuclease (Barnase) inhibitor
no
0.56
20
GFF6326
Gamma-glutamyl phosphate reductase (EC 1.2.1.41)
no
0.56
Or look for
negative cofitness