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  • Top cofit genes for GFF2905 from Variovorax sp. SCN45

    surface antigen gene
    SEED: surface antigen gene

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF424 Cobalamin synthase (EC 2.7.8.26) no 0.65
    2 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.61
    3 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.61
    4 GFF343 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) no 0.59
    5 GFF6884 FIG00932717: hypothetical protein no 0.59
    6 GFF4006 DNA polymerase I (EC 2.7.7.7) no 0.58
    7 GFF4095 no description no 0.58
    8 GFF2564 Two-component transcriptional response regulator, LuxR family no 0.58
    9 GFF4438 Sugar kinases, ribokinase family no 0.58
    10 GFF2855 Putative hydrolase or acyltransferase no 0.57
    11 GFF2046 no description no 0.57
    12 GFF2815 Primosomal replication protein N no 0.57
    13 GFF2065 Peptidase, M23/M37 family no 0.57
    14 GFF417 Aspartate aminotransferase (AspB-4) (EC 2.6.1.1) no 0.57
    15 GFF6193 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.57
    16 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) no 0.56
    17 GFF4398 Transcriptional regulator, AcrR family no 0.56
    18 GFF3800 Fumarylacetoacetate hydrolase family protein no 0.56
    19 GFF3250 Barstar, ribonuclease (Barnase) inhibitor no 0.56
    20 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) no 0.56

    Or look for negative cofitness