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  • Top cofit genes for GFF2904 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1873 KEGG: LacI family transcriptional regulator no 0.60
    2 GFF3032 Two-component transcriptional response regulator, LuxR family no 0.53
    3 GFF1965 Magnesium and cobalt efflux protein CorC no 0.53
    4 GFF4727 Two-component transcriptional response regulator, LuxR family no 0.52
    5 GFF3477 Phosphoprotein phosphatase no 0.52
    6 GFF4154 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.50
    7 GFF3002 Cobalt-containing nitrile hydratase subunit beta (EC 4.2.1.84) no 0.50
    8 GFF11 Two-component transcriptional response regulator, OmpR family no 0.49
    9 GFF4063 Cytochrome c family protein no 0.49
    10 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) no 0.48
    11 GFF6005 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.48
    12 GFF1875 no description no 0.48
    13 GFF3708 ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) / ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) no 0.47
    14 GFF4185 RNA polymerase ECF-type sigma factor no 0.47
    15 GFF3038 hypothetical protein no 0.46
    16 GFF627 Secretion protein HlyD no 0.46
    17 GFF3288 hypothetical protein no 0.45
    18 GFF6971 no description no 0.44
    19 GFF2727 Outer membrane protein romA no 0.44
    20 GFF5903 Iron-sulfur cluster regulator IscR no 0.44

    Or look for negative cofitness