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  • Top cofit genes for PS417_14800 from Pseudomonas simiae WCS417

    diguanylate cyclase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25790 aminoglycoside phosphotransferase no 0.23
    2 PS417_09015 AMP-binding protein no 0.23
    3 PS417_22815 permease no 0.23
    4 PS417_15940 mechanosensitive ion channel protein MscS 0.20 0.23
    5 PS417_10040 MFS transporter no 0.21
    6 PS417_25650 anhydro-N-acetylmuramic acid kinase no 0.21
    7 PS417_21085 GntR family transcriptional regulator 0.21 0.21
    8 PS417_09975 hypothetical protein no 0.21
    9 PS417_10970 effector protein 0.30 0.21
    10 PS417_03665 deoxyribodipyrimidine photolyase no 0.20
    11 PS417_27585 diaminopimelate epimerase 0.21 0.20
    12 PS417_07130 RNA polymerase sigma-H factor AlgU no 0.19
    13 PS417_15485 amino acid ABC transporter permease no 0.19
    14 PS417_24155 ATP-binding protein no 0.19
    15 PS417_26410 alginate lyase no 0.19
    16 PS417_27235 ribonucleotide reductase no 0.19
    17 PS417_04980 response regulator receiver protein no 0.19
    18 PS417_21695 succinylglutamate-semialdehyde dehydrogenase no 0.19
    19 PS417_02735 bacterioferritin no 0.19
    20 PS417_18215 AraC family transcriptional regulator no 0.19

    Or look for negative cofitness