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  • Top cofit genes for GFF289 from Variovorax sp. SCN45

    Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
    SEED: Probable HesA/MoeB/ThiF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3797 Ammonia monooxygenase 0.31 0.61
    2 GFF2855 Putative hydrolase or acyltransferase no 0.61
    3 GFF2763 33 kDa chaperonin HslO 0.75 0.61
    4 GFF6328 LPS-assembly lipoprotein LptE no 0.60
    5 GFF4553 RNA chaperone ProQ no 0.58
    6 GFF2129 small multidrug resistance family (SMR) protein 0.43 0.58
    7 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.49 0.58
    8 GFF2144 tRNA-dihydrouridine synthase DusB 0.34 0.57
    9 GFF4469 Cell division protein FtsA no 0.57
    10 GFF5675 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) no 0.57
    11 GFF4131 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.56
    12 GFF6887 Transporter, LysE family 0.23 0.56
    13 GFF4006 DNA polymerase I (EC 2.7.7.7) 0.55 0.56
    14 GFF3250 Barstar, ribonuclease (Barnase) inhibitor no 0.56
    15 GFF699 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.56
    16 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.44 0.55
    17 GFF5367 GTP cyclohydrolase 1 type 2 homolog YbgI 0.66 0.55
    18 GFF2522 Glutaredoxin-related protein 0.58 0.55
    19 GFF5701 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8) 0.59 0.55
    20 GFF4062 Copper resistance protein B 0.28 0.54

    Or look for negative cofitness