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  • Top cofit genes for GFF2888 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6665 Autolysin sensor kinase (EC 2.7.3.-) no 0.52
    2 GFF915 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.49
    3 GFF6359 FIG01219766: hypothetical protein no 0.47
    4 GFF3946 Probable low-affinity inorganic phosphate transporter no 0.47
    5 GFF6219 hypothetical protein no 0.46
    6 GFF4990 Acyl-CoA hydrolase (EC 3.1.2.20) no 0.46
    7 GFF6545 Uncharacterized MFS-type transporter no 0.45
    8 GFF3368 Pyrimidine permease no 0.45
    9 GFF3216 hypothetical protein no 0.45
    10 GFF7022 Amidohydrolase domain protein no 0.44
    11 GFF7281 no description no 0.44
    12 GFF2707 hypothetical protein no 0.44
    13 GFF5168 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no 0.44
    14 GFF52 Polyketide synthase modules and related proteins no 0.43
    15 GFF2647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.43
    16 GFF841 zinc finger, SWIM-type no 0.43
    17 GFF3311 FIG00349859: hypothetical protein no 0.43
    18 GFF2037 Acetylpolyamine aminohydrolase no 0.43
    19 GFF6072 Transcriptional regulator, LysR family no 0.43
    20 GFF1746 BUG/TctC family periplasmic protein no 0.43

    Or look for negative cofitness