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  • Top cofit genes for GFF2883 from Variovorax sp. SCN45

    CaiB/BaiF family protein
    SEED: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3479 no description no 0.53
    2 GFF6940 no description no 0.47
    3 GFF4846 Conjugative transfer protein TrbE no 0.47
    4 GFF4909 Two-component transcriptional response regulator, OmpR family no 0.47
    5 GFF6057 ABC-type Fe3+ transport system, periplasmic component no 0.46
    6 GFF4242 TRAP-type C4-dicarboxylate transport system, periplasmic component no 0.46
    7 GFF6810 no description no 0.46
    8 GFF677 FIG00931906: hypothetical protein no 0.45
    9 GFF6358 T6SS protein serine/threonine phosphatase PppA no 0.45
    10 GFF1116 Membrane-bound lytic murein transglycosylase D 0.32 0.44
    11 GFF121 Uncharacterized MFS-type transporter no 0.44
    12 GFF3805 hypothetical protein no 0.43
    13 GFF1430 hypothetical protein no 0.42
    14 GFF4423 Conjugative transfer protein TrbI no 0.42
    15 GFF3759 Uridine kinase family protein YggC homolog no 0.42
    16 GFF428 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.42
    17 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.41
    18 GFF1413 hypothetical protein no 0.41
    19 GFF2540 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases no 0.41
    20 GFF1437 Transcriptional regulator, LysR family no 0.40

    Or look for negative cofitness