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Cofit
Protein
Homologs
Top cofit genes for GFF2877 from
Variovorax sp. SCN45
Ribonuclease BN
SEED: Ribonuclease BN (EC 3.1.-.-)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3432
L-carnitine dehydratase/bile acid-inducible protein F
no
0.54
2
GFF6097
1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149)
0.27
0.48
3
GFF7087
oxidoreductase FAD/NAD(P)-binding domain protein
no
0.47
4
GFF3181
FIG005069: Hypothetical protein
no
0.47
5
GFF5581
SSU ribosomal protein S5p (S2e)
no
0.46
6
GFF3045
Glutamine ABC transporter, substrate-binding protein GlnH
no
0.46
7
GFF6256
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37)
no
0.46
8
GFF6474
hypothetical protein
no
0.46
9
GFF4597
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
no
0.46
10
GFF5011
Geranyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.5)
no
0.45
11
GFF5210
hypothetical protein
no
0.45
12
GFF3353
Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.44
13
GFF6095
1,2-phenylacetyl-CoA epoxidase, subunit C (EC 1.14.13.149)
no
0.44
14
GFF6468
TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
no
0.43
15
GFF7255
BUG/TctC family periplasmic protein
no
0.43
16
GFF5853
Type I secretion system ATPase, LssB family LapB
no
0.42
17
GFF7044
Inner membrane protein YedI
no
0.42
18
GFF2458
CzcABC family efflux RND transporter, membrane fusion protein
no
0.42
19
GFF1008
Glyoxalase family protein
no
0.42
20
GFF6845
ATPase involved in DNA repair
no
0.42
Or look for
negative cofitness