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  • Top cofit genes for GFF287 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6822 Peptidase C14, caspase catalytic subunit p20 no 0.64
    2 GFF6639 no description no 0.61
    3 GFF1154 Putative transmembrane protein no 0.60
    4 GFF6640 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.59
    5 GFF2995 hypothetical protein no 0.57
    6 GFF4527 Transcriptional regulator, GntR family no 0.57
    7 GFF7344 Transcriptional regulator, LysR family no 0.56
    8 GFF6574 Conjugative transfer protein TrbL no 0.56
    9 GFF3945 Phosphate transport regulator (distant homolog of PhoU) no 0.55
    10 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.55
    11 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) no 0.55
    12 GFF3788 putative secreted protein no 0.54
    13 GFF4782 Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II) no 0.54
    14 GFF6446 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.54
    15 GFF6730 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.54
    16 GFF3707 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) no 0.53
    17 GFF183 Virulence protein no 0.53
    18 GFF907 Transcriptional regulator, LysR family no 0.52
    19 GFF4799 hypothetical protein no 0.51
    20 GFF5174 Uncharacterized conserved protein no 0.50

    Or look for negative cofitness