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  • Top cofit genes for GFF2866 from Sphingobium sp. HT1-2

    Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
    SEED: Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
    KEGG: protocatechuate 4,5-dioxygenase, beta chain

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3525 hypothetical protein no 0.78
    2 GFF3842 ABC-type antimicrobial peptide transport system, ATPase component no 0.76
    3 GFF4605 Thiamine pyrophosphate-requiring enzymes no 0.71
    4 GFF1661 L,D-transpeptidase no 0.71
    5 GFF2065 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.71
    6 GFF4210 hypothetical protein no 0.70
    7 GFF4425 LysR-family transcriptional regulator similar to hydrogen peroxide-inducible genes activator no 0.70
    8 GFF3475 Uncharacterized protein YnbE no 0.70
    9 GFF3319 TonB-dependent receptor no 0.70
    10 GFF3679 hypothetical protein no 0.70
    11 GFF1611 tRNA (guanine(46)-N(7))-methyltransferase (EC 2.1.1.33) 0.63 0.69
    12 GFF1241 Transcriptional regulator, AraC family no 0.69
    13 GFF2378 hypothetical protein no 0.69
    14 GFF5363 GENE II AND X PROTEINS no 0.69
    15 GFF2225 TonB-dependent receptor no 0.69
    16 GFF2247 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.22 0.68
    17 GFF1659 Transcriptional regulator, LysR family no 0.68
    18 GFF4798 hypothetical protein no 0.68
    19 GFF2336 hypothetical protein no 0.68
    20 GFF2539 hypothetical protein no 0.68

    Or look for negative cofitness