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Cofit
Protein
Homologs
Top cofit genes for PS417_14610 from
Pseudomonas simiae WCS417
lysine transporter LysE
SEED: transporter, LysE family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_03930
thymidine phosphorylase
no
0.26
2
PS417
_19635
lipid kinase
no
0.25
3
PS417
_20585
chemotaxis protein
no
0.24
4
PS417
_19630
LuxR family transcriptional regulator
no
0.23
5
PS417
_19625
histidine kinase
no
0.23
6
PS417
_05135
nucleoid-associated protein
no
0.23
7
PS417
_22780
XRE family transcriptional regulator
no
0.23
8
PS417
_27430
hypothetical protein
no
0.22
9
PS417
_23580
peptidylprolyl isomerase
0.34
0.21
10
PS417
_00630
nitrate ABC transporter substrate-binding protein
0.36
0.21
11
PS417
_22265
chromosome segregation protein ScpA
no
0.21
12
PS417
_24705
D-alanyl-D-alanine carboxypeptidase
0.27
0.21
13
PS417
_26050
response regulator
no
0.21
14
PS417
_19615
chemotaxis protein CheW
0.27
0.21
15
PS417
_27690
XRE family transcriptional regulator
no
0.20
16
PS417
_15650
glutamine amidotransferase
no
0.20
17
PS417
_07585
hypothetical protein
no
0.19
18
PS417
_25380
hypothetical protein
no
0.19
19
PS417
_10340
alcohol dehydrogenase
no
0.19
20
PS417
_26045
hypothetical protein
no
0.19
Or look for
negative cofitness