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  • Top cofit genes for GFF286 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3451 no description no 0.69
    2 GFF4711 Transamidase GatB domain protein no 0.61
    3 GFF4776 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.59
    4 GFF4018 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.59
    5 GFF7139 MATE efflux family protein 0.51 0.57
    6 GFF378 RNA (nucleoside 2'-O)-methyltransferase 0.44 0.55
    7 GFF4843 Conjugative transfer protein TrbF no 0.54
    8 GFF1332 no description no 0.54
    9 GFF1764 hypothetical protein no 0.54
    10 GFF4469 Cell division protein FtsA no 0.53
    11 GFF4460 Phosphatidate cytidylyltransferase (EC 2.7.7.41) no 0.52
    12 GFF5782 BUG/TctC family periplasmic protein no 0.52
    13 GFF1797 FIG022199: FAD-binding protein no 0.51
    14 GFF864 no description no 0.51
    15 GFF578 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) no 0.50
    16 GFF6489 no description no 0.50
    17 GFF1120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.50
    18 GFF2739 Putative SAM-dependent methyltransferase Bucepa02006346 no 0.50
    19 GFF4227 Thiamine pyrophosphate-requiring enzymes no 0.50
    20 GFF6221 T6SS associated component TagF (ImpM) no 0.50

    Or look for negative cofitness