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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF286 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3451
no description
no
0.69
2
GFF4711
Transamidase GatB domain protein
no
0.61
3
GFF4776
Broad-specificity amino acid ABC transporter, substrate-binding protein
no
0.59
4
GFF4018
Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family
no
0.59
5
GFF7139
MATE efflux family protein
0.51
0.57
6
GFF378
RNA (nucleoside 2'-O)-methyltransferase
0.44
0.55
7
GFF4843
Conjugative transfer protein TrbF
no
0.54
8
GFF1332
no description
no
0.54
9
GFF1764
hypothetical protein
no
0.54
10
GFF4469
Cell division protein FtsA
no
0.53
11
GFF4460
Phosphatidate cytidylyltransferase (EC 2.7.7.41)
no
0.52
12
GFF5782
BUG/TctC family periplasmic protein
no
0.52
13
GFF1797
FIG022199: FAD-binding protein
no
0.51
14
GFF864
no description
no
0.51
15
GFF578
Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129)
no
0.50
16
GFF6489
no description
no
0.50
17
GFF1120
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.50
18
GFF2739
Putative SAM-dependent methyltransferase Bucepa02006346
no
0.50
19
GFF4227
Thiamine pyrophosphate-requiring enzymes
no
0.50
20
GFF6221
T6SS associated component TagF (ImpM)
no
0.50
Or look for
negative cofitness